Create perfect references to your books by simply scanning their barcode. Courtesy of zotero.org.Citationsy for iOS. Refreshing your Reference Page (Mac Legacy Word App) Adding an Appendix to your Paper (Mac Legacy Word App) If you are having trouble with your Reference Page in PERRLA for Word on Mac, it can sometimes be helpful to refresh the Reference page with 'clean' versions of your papers References.Thoughts on Reference Management Software Zotero 1.4, one of the reference management applications worth consideration.
Referencing App Software Is AnIt solves two problems that are otherwise very frustrating: (1) organizing and searching PDFs of journal articles, and (2) properly formatting a bibliography when writing a paper with citations. Reference management software is an incredibly useful tool for researchers and academics. It has a systematic and clean interface that allows you to manage your activities and accomplish tasks according to your set of daily goals. It is a simple to-do list that’s easy to use. Todoist is the app available for iOS, Android, Windows, MacOS, and browser users that medical students need to cross every task they plan out to.The original post is preserved at the bottom, though it’s likely not very useful given the amount of time that has passed since it was written.Last updated: JanuRecommendations for most peopleIf you want a free application, Zotero is the way to go.In October of 2018, they added support for Google Docs, which seems to work fairly well. Under that are a list of all the updates I’ve made to the post since 2015 in reverse chronological order. This is due to improvements in web technology, like pdf.js.I’ve added a summary of my current (April 2020) recommendations below.I assume the stability issues have been worked out since I last used it extensively several years ago, but let me know if there are still problems. It’s always had a great interface, though it has had stability problems in the past. Based on their maturity I expect they will be publicly available sometime in 2020.If you want native desktop and mobile apps, but don’t care about Google Docs integration, look at Papers.This app started out as an indie Mac-only app, changed hands several times, and eventually landed at Digital Science, who also own Altmetric and figshare. As of April 2020 there are private betas of Microsoft Word plug-ins (Windows and macOS), and iOS and Android apps.Paid-up-front software must be comparatively expensive (see: EndNote at $250). Free software is usually a bad idea because it’s not sustainable (except for Zotero, which is a non-profit and does have a subscription offering for expanded storage). You want your reference management software to be maintained long-term, and a subscription is the best business model for ensuring financial stability. Research is collaborative, and it’s crazy to not be able to share references (and PDFs) easily. Any software that doesn’t have good shared library support. I would ignore anything that hasn’t been around for at least 3 years. Again, stability is key for reference management software, and startups are by definition not stable. ![]() ![]() I’ve been experimenting with F1000 Workspace and Paperpile again. The URLs for CiteAs are nicely formatted ( for the stringr example), making it easy to create a “Cite this page” bookmarklet. Here’s an example for the stringr R package. CiteAs is a simple tool for getting a properly-formatted citation for any DOI or – more importantly – open source software. I recently found this post by Richard Gao from a year ago, which has a good overview of several popular reference managers. Once Paperpile’s iOS application is out, I expect I’ll be switching back. I find the Paperpile web interface much more streamlined than F1000’s, and the F1000 iOS application is also clunky due to not being fully native. Paperpile currently has an iOS application in private beta. Roland versaworks 50 downloadI briefly tested out Zotero’s Google Docs integration and it seems to work fine. Added link to ZotFile, a nice third-party plugin for Zotero’s desktop app. From their website:POLAR makes it easy to manage your reading.A powerful document manager for Mac, Windows, and Linux for managing web content, books, and notes and supports tagging, annotation, highlighting and keeps track of your reading progress.If you don’t care about inserting citations and automatically generating a bibliography, POLAR might be worth a look. Citationsy is a free service for easily building bibliographies, similar to ZoteroBib.I found two reference management services I’ve never heard of before:I haven’t tried these out yet – please let me know if you have any experience with them.I also ran across POLAR, which is not a reference manager per se but does have some nice functionality for working with a library of PDFs. It looks like its landed on its feet at Digital Science, which is great – it’s the only reference manager I’ve seen that has native apps on iOS, macOS, and Windows! Update: June 12, 2018Mendeley appears to be doing some sketchy stuff to prevent exporting data. I can even move PDFs into subfolders and the corresponding reference maintain its link.I’d like to try Papers again, but I don’t have the bandwidth right now and no Google Docs integration is a deal-breaker for me. It’s been around forever ( since 2003!), and I believe this is the go-to option for citing in LaTeX documents.To make this page more user-friendly, I added a “Recommendations for most people” section that I will update separately from these updates.My current application of choice for my personal use is Bookends, primarily because it has a decent iOS application and it keeps all the PDFs in a folder on iCloud, rather than hiding them in a proprietary database. JabRef is an open source reference manager for BibTeX-format references. Citationsy, a light-weight reference manager (no word processor plugins), built as a replacement for RefME Update: May 24, 2018Zotero recently released ZoteroBib, which is a tool for quickly generating bibliographies from DOIs, PubMed IDs, etc. Most users are not sharing computers with untrustworthy people, and the operating system provides protections that seems sufficient for non-sensitive data like references.This makes Mendeley a hard no for me until they provide a way to export all data to another reference management application. This is a bad thing – this webpage is a testament to the volatility of reference management software, so it’s critical users can get their data out in the (quite likely) event a given software vendor goes belly up.And I don’t buy Mendeley’s security argument. At the same time, Mendeley continues to import data from Zotero’s own open database.(Zotero is a direct competitor to Mendeley (though Zotero is a non-profit), so take this with a grain of salt.)In any case, this will lock users into Mendeley. Mendeley made this change a few months after Zotero publicly announced work on an importer, despite having long touted the openness of its database format as a guarantee against lock-in. ![]()
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